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Chromogenic bacteria: causes, black teeth in children, and solutions

10 min read

Summarize this article with AI

chromogenic bacteria

Have you noticed small black spots on your child's teeth? It can be alarming, but don't worry: it's not necessarily a cavity. Often, these spots are caused by a natural bacterium in the mouth that produces dark pigments.


Even though it's common in children and generally harmless, questions inevitably arise. What exactly is it? Is it bad for teeth? And most importantly, how can you prevent these stains from coming back? We'll explain everything.

What is a chromogenic bacterium?

Simple and understandable definition

You may have already noticed black or brown spots on your child's teeth, especially near the gums. This is often due to a naturally occurring bacterium called a " chromogen ," which simply means that it produces color.


When this bacterium comes into contact with saliva or certain elements like iron , it can create pigments that deposit on the teeth. This is neither an infection nor a sign of poor hygiene. These bacteria are part of the oral flora. It simply depends on the balance of your child's oral flora: in some, these stains appear, in others, not.

Why do we talk about tooth discoloration?


It's a matter of chemical reaction. When certain bacteria encounter compounds in saliva, and sometimes iron from food, it can create a black or dark brown deposit. This is particularly visible on the light-colored teeth of young children.


Contrary to what one might think, this isn't necessarily a sign of poor brushing. Many children with these stains actually have very good dental hygiene . The difference is simply a surface deposit. The tooth itself isn't damaged.

How to recognize a staining caused by a chromogenic bacterium?

Typical appearance of the affected teeth

These discolorations have a fairly typical appearance, which dentists often spot at a glance:

  • A thin black or dark brown border,

  • Located near the gum,

  • Which follows the contour of the tooth,

  • And it can affect several teeth , often symmetrically.


The tooth surface remains smooth to the touch. The enamel is neither damaged nor chipped; it is a colored deposit that adheres to the tooth. These stains appear mainly on baby teeth, but can also be seen on the permanent teeth of some children.

Difference between chromogenic bacteria and tooth decay

They are often confused because the black color immediately brings to mind a cavity . However, they are not at all the same thing. Cavities cause:

  • A loss of dental material

  • A softened or sunken area,

  • Sometimes there are sensitivities or pains,

  • It progresses if it is not treated.


Conversely, the coloration associated with chromogenic bacteria:

  • Stay on the surface.

  • It doesn't hurt.

  • It does not weaken the tooth.

  • This does not indicate an active infection.

What are the causes of chromogenic bacteria?

Role of the oral flora

This tooth-staining bacterium is not an external invader; it is a natural part of the oral flora. In some young people, the balance of this flora promotes the proliferation of pigmented bacteria. By reacting with saliva or small amounts of iron, they deposit dark stains.


It's neither contagious nor necessarily linked to poor hygiene. Some studies even suggest that these children may have fewer cavities, thanks to their unique gut flora. It's therefore generally a benign phenomenon, although it's worth monitoring.

Contributing factors

Not all children develop these spots. Several factors may be involved.

  • A specific composition of their oral flora,

  • Saliva naturally rich in certain minerals ,

  • Taking iron supplements ,

  • Consuming iron-rich water,

  • A family plot (sometimes we see several brothers and sisters affected).


Of course, insufficient hygiene can promote the accumulation of deposits , but the presence of these black spots does not automatically mean that the child is brushing their teeth incorrectly.

Is the chromogenic bacterium dangerous?

Risk to dental health

In the vast majority of cases, this bacterium is not dangerous. It simply discolors the tooth without attacking it itself. Unlike cavities, there is no hole, no pain, and the enamel remains intact.


In other words, these black dyes:

  • They are not an aggressive infection,

  • They do not weaken the tooth,

  • They do not cause sensitivity.

  • They do not require emergency intervention.


That said, a visit to a professional is essential. Only they can confirm that it is indeed the chromogenic bacteria and rule out early-stage cavities or other problems.

Aesthetic and psychological impact

While the medical risk is minimal, the cosmetic impact can be significant. These spots are often quite noticeable , and for a child, this can sometimes lead to a loss of confidence.


Many parents also feel guilty, mistakenly believing that these stains are a sign of poor brushing. Hence the importance of explaining this phenomenon simply to the child and those around them : informing and reassuring them already alleviates many concerns.

How to treat black teeth caused by a chromogenic bacterium?

Cleaning and descaling at the dentist's office

The first thing to do is make an appointment. A professional cleaning is usually enough to remove these stains. The dentist will gently polish the teeth and, if necessary, perform a light scaling with appropriate instruments. It's a quick and painless procedure that restores the teeth to their natural color.


Be careful, avoid home remedies ! Whitening toothpastes or overly abrasive methods are not suitable for young children. Baby tooth enamel is fragile, and brushing too aggressively could damage it.

Why stains can recur


One of the most frustrating aspects of chromogenic bacteria is the tendency of stains to reappear, even after perfect cleaning.

This is normal and not a sign of treatment failure. The bacteria are part of a child's natural oral flora, and as long as the contributing factors are present, the staining can reappear. In many children, this is temporary and disappears on its own as they grow older.

Can the chromogenic bacterium be permanently eliminated?

Trying to eliminate it completely is neither feasible nor really desirable: bacterial balance is complex and essential for good oral health .


However, we can take action to:

  • Reduce pigment buildup,

  • Control the appearance of spots,

  • Space out relapses through regular monitoring.


In many children, these stains eventually fade over time. Saliva changes, the oral flora evolves, and often the phenomenon disappears during adolescence.

Prevention: how to limit the appearance of black discoloration?

Good hygiene habits

Dental hygiene adapted to the child's age is key. Here are a few simple tips:

Should the diet be changed?

Diet is not the direct cause of these discolorations, but certain factors can contribute to them. These include:

  • Check the iron content of your tap water.

  • Inform the professional if the child is taking iron supplements.

  • Limit your intake of highly coloured drinks (sodas, dark juices, etc.).

  • Prioritize a balanced diet , without excess sugar.


There's no need to impose strict restrictions. Overall balance is key. If you have any questions, your doctor will be able to advise you without imposing unnecessary changes.

Testimonials and feedback

In a doctor's office, the discovery of a chromogenic bacterium is often a source of concern and confusion for parents. Here are some of their frequently heard reactions.


"We thought it was a serious cavity, even though he brushed his teeth properly."


"The spots appeared in just a few weeks, without any pain."


"The dentist reassured us: it wasn't a cavity, just a chromogenic bacterium."


"After the cleaning, her teeth were perfect... but the marks came back a few months later."


"The hardest part was the way the other children looked at me at school."

FAQ: Frequently Asked Questions

What is a chromogenic bacterium?

This is a bacterium naturally present in our mouths, which produces dark pigments that can deposit black stains on the surface of teeth, particularly in children.

Does the chromogenic bacterium cause cavities?

No, not at all. It only causes superficial discoloration, without damaging the tooth. It doesn't cause cavities, but it's best to consult a dentist to be absolutely sure.

How to remove black teeth in children?

A good professional cleaning is usually sufficient. Abrasive products should be avoided at home, as they could weaken the enamel.

Are black stains on teeth serious?

In the vast majority of cases, no. Even if they look impressive, they do not threaten the health of your teeth.

Does the chromogenic bacterium disappear with age?

Often, yes. Over time, the balance of the oral flora and the composition of saliva change, and these colorations tend to lessen or disappear during adolescence.

In summary: the key points to remember

These small black spots that can appear on teeth, especially in children, are often caused by a chromogenic bacterium . Rest assured, even if their appearance may be alarming, they are not cavities and they do not damage tooth enamel.


A thorough cleaning is usually enough to remove them. However, since this bacterium is part of our oral flora , the stains can sometimes reappear, though they tend to fade with age. The key is to have a clear diagnosis , regular checkups, and maintain good oral hygiene.

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